BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B10SP1|AL425990
(808 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig628 1249 0.0
>3x_Contig628
Length = 1864
Score = 1249 bits (628), Expect = 0.0
Identities = 650/656 (99%), Gaps = 2/656 (0%)
Strand = Plus / Plus
Query: 5 ttggattgatgtgttgaacgtttatctaacacataatcagaatgatagtgaactgatacg 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 ttggattgatatgttgaacgtttatctaacacataatcagaatgatagtgaactgatacg 1265
Query: 65 aaaccagttcaggaaatgcgaatccctcgtgggatcatcatttcctctcgcacgatattt 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1266 aaaccagttcaggaaatgcgaatccctcgtgggatc-tcatttcctctcgcacgatattt 1324
Query: 125 gggataagcacattgcatatgaaacaagactacagaactgggaaaacgtatttgaggtgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 gggataagcacattgcatatgaaacaagactacagaactgggaaaacgtatttgaggtgt 1384
Query: 185 acaaacaagtcatgcagcaacctttgcatcaatatgcaagatactacaccagctttaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1385 acaaacaagtcatgcagcaacctttgcatcaatatgcaagatactacaccagctttaagg 1444
Query: 245 aattcttggaatatcacccagagtttgctaatagggaatcaagcatccatttggatacca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1445 aattcttggaatatcacccagagtttgctaatagggaatcaagcatccatttggatacca 1504
Query: 305 catttatttctaaccaggagaaggtgaacaaaatatggacatatgaatcacaaataaaac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 catttatttctaaccaggagaaggtgaacaaaatatggacatatgaatcacaaataaaac 1564
Query: 365 agccatttttcaatatccctgagcttcccgagaatgagattcagaattgggatgcttatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 agccatttttcaatatccctgagcttcccgagaatgagattcagaattgggatgcttatc 1624
Query: 425 tatctttcttaatcaacaacactgagttcagtacagaattaataaaatcgacgtattgag 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1625 tatctttcttaatcaacaacactgagttcagtacagaattaataaaatcgacgt-ttgag 1683
Query: 485 agatgtttgattccatgtttaagatacgaatatttctggggagcctatattgactggact 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 agatgtttgattccatgtttaagatacgaatatttctggggagcctatattgactggact 1743
Query: 545 garaggacttttggtcccgaatgtacgttccccttgtttgavagagcactccgggctctt 604
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1744 gaaaggacttttggtcccgaatgtacgttccccttgtttgaaagagcactccgggctctt 1803
Query: 605 cctgctgataataaatctttcaagcaaaaatacatcaaatatttggaaagtaatat 660
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1804 cctgctgataataaatctttgaagcaaaaatacatcaaatatttggaaagtaatat 1859
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6257
Number of Sequences: 1807
Number of extensions: 6257
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 808
length of database: 10,358,551
effective HSP length: 16
effective length of query: 792
effective length of database: 10,329,639
effective search space: 8181074088
effective search space used: 8181074088
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)